STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF20871.1Protein of unknown function DUF6 transmembrane; PFAM: Drug/metabolite transporter; KEGG: pmy:Pmen_1087 hypothetical protein. (281 aa)    
Predicted Functional Partners:
AEF20870.1
SMART: Water stress and hypersensitive response domain; KEGG: aau:AAur_pTC10203 putative lipoprotein.
 
     0.709
AEF20872.1
Tetracycline transcriptional repressor MAATS-type domain-containing protein; PFAM: Transcription regulator MAATS, C-terminal; Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: pmy:Pmen_3714 TetR family transcriptional regulator.
       0.531
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.