STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF21165.1KEGG: pmy:Pmen_1126 ornithine-acyl[acyl carrier protein] N-acyltransferase. (251 aa)    
Predicted Functional Partners:
AEF21164.1
KEGG: pmy:Pmen_1125 lyso-ornithine lipid acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase.
 
  
 0.962
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.503
AEF21166.1
KEGG: lhk:LHK_01654 hypothetical protein.
       0.498
AEF21962.1
Metallophosphoesterase; PFAM: Metallo-dependent phosphatase; KEGG: pfl:PFL_1585 Ser/Thr protein phosphatase family protein.
 
    0.498
AEF21167.1
KEGG: pmy:Pmen_1128 beta-lactamase domain-containing protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like.
       0.443
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.