STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF22259.1Hypothetical protein. (32 aa)    
Predicted Functional Partners:
AEF22258.1
KEGG: pmy:Pmen_2775 DNA topoisomerase.
       0.773
AEF22255.1
PFAM: Major facilitator superfamily MFS-1; KEGG: pag:PLES_34771 putative major facilitator superfamily (MFS) transporter.
       0.547
AEF22256.1
Protein of unknown function DUF1272; KEGG: avi:Avi_3484 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF1272.
       0.547
AEF22257.1
Transcriptional regulator, AraC family; KEGG: pmy:Pmen_2164 transcriptional regulator; PFAM: ThiJ/PfpI; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain.
       0.547
AEF22260.1
KEGG: pmy:Pmen_2165 hypothetical protein.
       0.455
Your Current Organism:
Pseudomonas fulva
NCBI taxonomy Id: 743720
Other names: P. fulva 12-X, Pseudomonas fulva 12-X, Pseudomonas fulva str. 12-X, Pseudomonas fulva strain 12-X
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.