STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV26255.1PFAM: Interferon-induced transmembrane protein; KEGG: xcv:XCV0540 hypothetical protein. (112 aa)    
Predicted Functional Partners:
ADV26254.1
KEGG: xom:XOO_0493 hypothetical protein.
 
     0.942
ADV26090.1
PFAM: Interferon-induced transmembrane protein; KEGG: fal:FRAAL0658 hypothetical protein.
  
     0.684
ADV28083.1
KEGG: smt:Smal_1215 hypothetical protein.
  
     0.656
ADV25962.1
KEGG: xac:XAC0215 hypothetical protein.
  
     0.620
ADV26839.1
PFAM: secretion protein HlyD family protein; KEGG: xcv:XCV1501 membrane fusion protein.
  
 
 0.583
ADV28321.1
KEGG: smt:Smal_3500 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.583
ADV28857.1
KEGG: sml:Smlt1597 putative HlyD-family secretion protein.
  
 
 0.583
ADV28029.1
KEGG: rpf:Rpic12D_3106 hypothetical protein.
  
     0.576
ADV27513.1
KEGG: smt:Smal_1566 short-chain dehydrogenase/reductase SDR.
  
     0.551
ADV26098.1
PFAM: O-antigen polymerase; KEGG: xcv:XCV3922 putative cell surface polysaccharide polymerase/ligase.
 
     0.549
Your Current Organism:
Pseudoxanthomonas suwonensis 111
NCBI taxonomy Id: 743721
Other names: P. suwonensis 11-1, Pseudoxanthomonas suwonensis 11-1, Pseudoxanthomonas suwonensis str. 11-1, Pseudoxanthomonas suwonensis strain 11-1
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