STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV26941.1Hypothetical protein; KEGG: xcb:XC_1337 predicted periplasmic protein (DUF2271); region: DUF2271; cl01469. (170 aa)    
Predicted Functional Partners:
ADV26942.1
Hypothetical protein; KEGG: xcb:XC_1338 uncharacterized protein conserved in bacteria [function unknown]; region: COG3295; COG3295.
   
 0.991
ADV26940.1
PFAM: Nickel transport complex, NikM subunit, transmembrane; KEGG: xac:XAC2946 hypothetical protein.
 
  
 0.975
ADV26939.1
ApbE family lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
 
    0.962
ADV26938.1
PFAM: flavodoxin/nitric oxide synthase; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: smt:Smal_0983 flavodoxin/nitric oxide synthase.
 
     0.892
ADV26943.1
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cja:CJA_2539 exogenous ferric siderophore TonB-dependent receptor.
 
     0.753
ADV27727.1
KEGG: dac:Daci_3075 PepSY-associated TM helix domain-containing protein.
 
  
 0.575
Your Current Organism:
Pseudoxanthomonas suwonensis 111
NCBI taxonomy Id: 743721
Other names: P. suwonensis 11-1, Pseudoxanthomonas suwonensis 11-1, Pseudoxanthomonas suwonensis str. 11-1, Pseudoxanthomonas suwonensis strain 11-1
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