STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV28005.1KEGG: xca:xccb100_3262 hypothetical protein. (224 aa)    
Predicted Functional Partners:
ADV28004.1
KEGG: xcv:XCV1218 hypothetical protein.
       0.718
dnaE2
DNA polymerase III, alpha subunit; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.
       0.697
ADV28007.1
PFAM: UMUC domain protein DNA-repair protein; KEGG: xcb:XC_3149 active site residues; other site.
       0.697
ADV27770.1
KEGG: smt:Smal_1219 transcriptional regulator, AraC family; PFAM: Ada metal-binding domain-containing protein; helix-turn-helix- domain containing protein AraC type; AlkA domain protein; HhH-GPD family protein; SMART: Helix-turn-helix, AraC domain; HhH-GPD family protein.
  
  
 0.548
ADV28009.1
Transcriptional repressor, LexA family; Represses a number of genes involved in the response to DNA damage (SOS response).
     
 0.538
ADV28920.1
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
   
    0.535
ADV28008.1
KEGG: xca:xccb100_3246 hypothetical protein.
     
 0.532
Your Current Organism:
Pseudoxanthomonas suwonensis 111
NCBI taxonomy Id: 743721
Other names: P. suwonensis 11-1, Pseudoxanthomonas suwonensis 11-1, Pseudoxanthomonas suwonensis str. 11-1, Pseudoxanthomonas suwonensis strain 11-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.