STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ79750.1KEGG: lby:Lbys_2336 hypothetical protein. (184 aa)    
Predicted Functional Partners:
ADZ79751.1
Two component transcriptional regulator, LytTR family; KEGG: phe:Phep_3159 response regulator receiver; PFAM: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SMART: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain.
       0.521
ADZ79749.1
KEGG: lby:Lbys_2338 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal.
       0.493
Your Current Organism:
Sphingobacterium sp. 21
NCBI taxonomy Id: 743722
Other names: S. sp. 21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.