STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S8DT16_FOMPIMFAP1 domain-containing protein. (535 aa)    
Predicted Functional Partners:
S8E2G9_FOMPI
C2H2-type domain-containing protein.
   
 0.997
S8ESL2_FOMPI
Uncharacterized protein.
   
 0.996
S8EF76_FOMPI
Uncharacterized protein.
   
 0.994
S8FWR3_FOMPI
Uncharacterized protein.
   
 0.994
S8EQ28_FOMPI
Uncharacterized protein.
   
 0.993
S8EE52_FOMPI
Nop domain-containing protein.
   
 0.991
S8FR69_FOMPI
Uncharacterized protein.
   
  0.987
S8E6J6_FOMPI
SF3b1 domain-containing protein.
   
 
 0.983
S8EH62_FOMPI
U1-type domain-containing protein.
  
 
 0.983
S8EP50_FOMPI
Uncharacterized protein.
   
 
 0.982
Your Current Organism:
Fomitopsis pinicola
NCBI taxonomy Id: 743788
Other names: F. pinicola FP-58527 SS1, Fomitopsis pinicola FP-58527, Fomitopsis pinicola FP-58527 SS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.