STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S8E4E0_FOMPIUncharacterized protein. (352 aa)    
Predicted Functional Partners:
S8G454_FOMPI
Uncharacterized protein.
   
 0.873
S8F3U4_FOMPI
RRM domain-containing protein.
   
 0.856
S8EJI4_FOMPI
Uncharacterized protein.
   
 0.815
S8FK14_FOMPI
Uncharacterized protein.
   
 0.814
S8EMD1_FOMPI
Nuclear cap-binding protein subunit 2.
    
 0.778
S8FSQ5_FOMPI
Small nuclear ribonucleoprotein Sm D2.
   
 
 0.740
S8E249_FOMPI
RRM domain-containing protein.
   
 0.735
S8E2L3_FOMPI
Uncharacterized protein.
   
 0.735
S8EDZ3_FOMPI
Uncharacterized protein.
   
 0.735
S8DRI5_FOMPI
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 
 0.729
Your Current Organism:
Fomitopsis pinicola
NCBI taxonomy Id: 743788
Other names: F. pinicola FP-58527 SS1, Fomitopsis pinicola FP-58527, Fomitopsis pinicola FP-58527 SS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.