STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S8EB61_FOMPICog4 domain-containing protein. (744 aa)    
Predicted Functional Partners:
S8DVM5_FOMPI
Uncharacterized protein.
    
 0.994
S8EFL1_FOMPI
Uncharacterized protein.
   
 0.993
S8F574_FOMPI
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
   
 0.991
S8EMN9_FOMPI
Uncharacterized protein.
   
 0.989
S8DRL6_FOMPI
Uncharacterized protein.
    
 0.988
S8DUK2_FOMPI
Uncharacterized protein.
    
 0.988
S8EE49_FOMPI
Uncharacterized protein.
    
 0.988
S8EHA4_FOMPI
Uncharacterized protein.
    
 
 0.896
S8EL34_FOMPI
t-SNARE coiled-coil homology domain-containing protein.
    
 0.873
S8FTQ7_FOMPI
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.868
Your Current Organism:
Fomitopsis pinicola
NCBI taxonomy Id: 743788
Other names: F. pinicola FP-58527 SS1, Fomitopsis pinicola FP-58527, Fomitopsis pinicola FP-58527 SS1
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