STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
whiAHypothetical protein; Involved in cell division and chromosome segregation. (279 aa)    
Predicted Functional Partners:
ppa
Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
     
 0.829
MYB_00070
COG0670 Integral membrane protein, interacts with FtsH.
       0.828
polC
DNA polymerase III PolC; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
 
     0.692
trxB
COG0492 Thioredoxin reductase.
  
  
 0.533
MYB_02170
COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain.
 
     0.517
ktrA
Potassium uptake protein KtrA; COG0569 K+ transport systems, NAD-binding component.
       0.491
MYB_01185
COG4487 Uncharacterized protein conserved in bacteria.
  
     0.485
MYB_00570
COG4487 Uncharacterized protein conserved in bacteria.
  
     0.471
MYB_02495
ABC transporter permease; COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters.
 
     0.428
ftsZ
COG0206 Cell division GTPase.
     
 0.426
Your Current Organism:
Mycoplasma bovoculi
NCBI taxonomy Id: 743966
Other names: M. bovoculi M165/69, Mycoplasma bovoculi ATCC 29104, Mycoplasma bovoculi M165/69, Mycoplasma bovoculi str. M165/69, Mycoplasma bovoculi strain M165/69
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.