STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYB_00150Hypothetical protein; Possible DNA polymerase III delta subunit. (310 aa)    
Predicted Functional Partners:
dnaN
COG0592 DNA polymerase sliding clamp subunit (PCNA homolog).
 
 
 0.998
dnaE
COG0587 DNA polymerase III, alpha subunit.
  
 0.998
dnaX
DNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
   
 0.992
MYB_02470
DNA polymerase III subunit delta; COG0470 ATPase involved in DNA replication.
   
 0.991
polC
DNA polymerase III PolC; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
    
 0.917
MYB_00145
Hypothetical protein; COG0658 Predicted membrane metal-binding protein; polytopic membrane protein.
     
 0.825
MYB_00140
Predicted membrane protein with N-terminal signal sequence.
       0.791
MYB_00715
COG0258 5'-3' exonuclease (including N-terminal domain of PolI).
     
 0.678
rpmB
COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
 
     0.598
MYB_01100
Hypothetical protein.
     
 0.563
Your Current Organism:
Mycoplasma bovoculi
NCBI taxonomy Id: 743966
Other names: M. bovoculi M165/69, Mycoplasma bovoculi ATCC 29104, Mycoplasma bovoculi M165/69, Mycoplasma bovoculi str. M165/69, Mycoplasma bovoculi strain M165/69
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