STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsdRType I restriction-modification system endonuclease; Subunit R is required for both nuclease and ATPase activities, but not for modification. (1058 aa)    
Predicted Functional Partners:
hsdM
COG0286 Type I restriction-modification system methyltransferase subunit.
 
 0.992
hsdS-2
Type I site-specific DNA methyltransferase specificity subunit; COG0732 Restriction endonuclease S subunits; gene contains heteropolypurine tract in C-terminus that may be subject to frameshift mutation by slipped strand mispairing.
 
  
 0.878
hsdS-3
Type I site-specific DNA methyltransferase specificity subunit; COG0732 Restriction endonuclease S subunits.
  
  
 0.871
MYB_00130
COG0286 Type I restriction-modification system methyltransferase subunit.
  
 
 0.810
MYB_01295
Putative DNA methylase; COG0286 Type I restriction-modification system methyltransferase subunit.
  
 
 0.810
hsdS-1
Type I site-specific DNA methyltransferase specificity subunit; COG0732 Restriction endonuclease S subunits; gene contains heteropolypurine tract in C-terminus that may be subject to frameshift mutation by slipped strand mispairing.
 
  
 0.808
MYB_00980
Hypothetical protein.
       0.600
MYB_00940
COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen.
  
    0.477
Your Current Organism:
Mycoplasma bovoculi
NCBI taxonomy Id: 743966
Other names: M. bovoculi M165/69, Mycoplasma bovoculi ATCC 29104, Mycoplasma bovoculi M165/69, Mycoplasma bovoculi str. M165/69, Mycoplasma bovoculi strain M165/69
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.