Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MYE_00830 | MYE_00835 | MYE_00830 | MYE_00835 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.807 |
MYE_00830 | nrdE | MYE_00830 | MYE_00825 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonucleotide-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.408 |
MYE_00830 | nrdI | MYE_00830 | MYE_00820 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonucleoside-diphosphate reductase stimulatory protein; Probably involved in ribonucleotide reductase function. | 0.408 |
MYE_00830 | tsaD | MYE_00830 | MYE_00840 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | tRNA N6-adenosine threonylcarbamoyltransferase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.451 |
MYE_00835 | MYE_00830 | MYE_00835 | MYE_00830 | Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.807 |
MYE_00835 | tsaD | MYE_00835 | MYE_00840 | Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology. | tRNA N6-adenosine threonylcarbamoyltransferase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.512 |
nrdE | MYE_00830 | MYE_00825 | MYE_00830 | Ribonucleotide-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.408 |
nrdE | nrdI | MYE_00825 | MYE_00820 | Ribonucleotide-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Ribonucleoside-diphosphate reductase stimulatory protein; Probably involved in ribonucleotide reductase function. | 0.985 |
nrdI | MYE_00830 | MYE_00820 | MYE_00830 | Ribonucleoside-diphosphate reductase stimulatory protein; Probably involved in ribonucleotide reductase function. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.408 |
nrdI | nrdE | MYE_00820 | MYE_00825 | Ribonucleoside-diphosphate reductase stimulatory protein; Probably involved in ribonucleotide reductase function. | Ribonucleotide-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.985 |
tsaD | MYE_00830 | MYE_00840 | MYE_00830 | tRNA N6-adenosine threonylcarbamoyltransferase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.451 |
tsaD | MYE_00835 | MYE_00840 | MYE_00835 | tRNA N6-adenosine threonylcarbamoyltransferase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.512 |