STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYF_01375HIT domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (110 aa)    
Predicted Functional Partners:
MYF_01370
P60-like lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.767
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  0.759
MYF_01365
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.743
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.737
MYF_01595
Type III restriction enzyme, res subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.736
MYF_01650
Type III restriction modification system endonuclease subunit Res; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.736
MYF_03210
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.736
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.735
MYF_01360
COF family HAD hydrolase protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.520
metG
methionyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.499
Your Current Organism:
Mycoplasma flocculare
NCBI taxonomy Id: 743971
Other names: M. flocculare ATCC 27399, Mycoplasma flocculare ATCC 27399, Mycoplasma flocculare Ms42, Mycoplasma flocculare str. ATCC 27399, Mycoplasma flocculare strain ATCC 27399
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.