STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oppB-2Oligopeptide ABC transporter system permease OppB; Derived by automated computational analysis using gene prediction method: Protein Homology. (366 aa)    
Predicted Functional Partners:
oppC-2
Oligopeptide ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
oppF-2
Oligopeptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 
 0.997
MYF_02630
Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.997
oppD-2
Oligopeptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 0.996
oppC
Oligopeptide ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.990
oppD
Oligopeptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 
 0.987
oppF
Oligopeptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
 
 
 0.941
oppB
Oligopeptide ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.928
MYF_02625
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.839
MYF_02600
Hypothetical protein.
       0.554
Your Current Organism:
Mycoplasma flocculare
NCBI taxonomy Id: 743971
Other names: M. flocculare ATCC 27399, Mycoplasma flocculare ATCC 27399, Mycoplasma flocculare Ms42, Mycoplasma flocculare str. ATCC 27399, Mycoplasma flocculare strain ATCC 27399
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.