MYF_02915 protein (Mycoplasma flocculare) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

MYF_02915

Sugar ABC transporter permaese protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. (569 aa)

Predicted Functional Partners:

MYF_02910

0.998

MYF_02920

0.997

MYF_02905

0.966

tdk

0.627

Your Current Organism:

Mycoplasma flocculare

NCBI taxonomy Id: 743971
Other names: M. flocculare ATCC 27399, Mycoplasma flocculare ATCC 27399, Mycoplasma flocculare Ms42, Mycoplasma flocculare str. ATCC 27399, Mycoplasma flocculare strain ATCC 27399

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MYF_02905	MYF_02910	MYF_02905	MYF_02910	Sugar ABC transporter substrate-binding lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.969
MYF_02905	MYF_02915	MYF_02905	MYF_02915	Sugar ABC transporter substrate-binding lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permaese protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	0.966
MYF_02905	MYF_02920	MYF_02905	MYF_02920	Sugar ABC transporter substrate-binding lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	0.968
MYF_02905	tdk	MYF_02905	MYF_02925	Sugar ABC transporter substrate-binding lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thymidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.460
MYF_02910	MYF_02905	MYF_02910	MYF_02905	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.969
MYF_02910	MYF_02915	MYF_02910	MYF_02915	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permaese protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	0.998
MYF_02910	MYF_02920	MYF_02910	MYF_02920	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	0.997
MYF_02910	tdk	MYF_02910	MYF_02925	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Thymidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.624
MYF_02915	MYF_02905	MYF_02915	MYF_02905	Sugar ABC transporter permaese protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	Sugar ABC transporter substrate-binding lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.966
MYF_02915	MYF_02910	MYF_02915	MYF_02910	Sugar ABC transporter permaese protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
MYF_02915	MYF_02920	MYF_02915	MYF_02920	Sugar ABC transporter permaese protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	Sugar ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	0.997
MYF_02915	tdk	MYF_02915	MYF_02925	Sugar ABC transporter permaese protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	Thymidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.627
MYF_02920	MYF_02905	MYF_02920	MYF_02905	Sugar ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	Sugar ABC transporter substrate-binding lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.968
MYF_02920	MYF_02910	MYF_02920	MYF_02910	Sugar ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
MYF_02920	MYF_02915	MYF_02920	MYF_02915	Sugar ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	Sugar ABC transporter permaese protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	0.997
MYF_02920	tdk	MYF_02920	MYF_02925	Sugar ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	Thymidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.601
tdk	MYF_02905	MYF_02925	MYF_02905	Thymidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter substrate-binding lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.460
tdk	MYF_02910	MYF_02925	MYF_02910	Thymidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.624
tdk	MYF_02915	MYF_02925	MYF_02915	Thymidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permaese protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	0.627
tdk	MYF_02920	MYF_02925	MYF_02920	Thymidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sugar ABC transporter permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.	0.601

Network Stats

number of nodes:

11

number of edges:

55

average node degree:

10

avg. local clustering coefficient:

1

expected number of edges:

15

PPI enrichment p-value:

1.55e-15

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0006098

Pentose-phosphate shunt

4 of 11

1.93

0.00010

GO:0046365

Monosaccharide catabolic process

4 of 18

1.71

1.7

0.00017

GO:0005996

Monosaccharide metabolic process

5 of 39

1.47

1.55

0.00010

GO:0019323

Pentose catabolic process

3 of 8

1.94

1.49

0.0011

GO:0044282

Small molecule catabolic process

6 of 60

1.37

1.43

0.00010

(more ...)

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:877

NADPH regeneration, and Gluconate transporter

6 of 8

2.24

4.18

1.95e-09

CL:757

Carbon metabolism, and Pyruvate metabolism

7 of 68

1.38

1.83

1.16e-06

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

thl00040

Pentose and glucuronate interconversions

4 of 12

1.89

2.31

9.85e-06

thl00030

Pentose phosphate pathway

5 of 27

1.63

2.12

4.35e-06

thl01120

Microbial metabolism in diverse environments

8 of 123

1.18

1.49

4.94e-07

thl01200

Carbon metabolism

5 of 65

1.25

1.27

0.00012

thl00480

Glutathione metabolism

2 of 8

1.76

1.01

0.0096

(more ...)

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0005856

Cytoskeleton

3 of 20

1.54

0.79

0.0236

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR036409

Class II aldolase/adducin N-terminal domain superfamily

3 of 3

2.37

1.57

0.0012

IPR001303

Class II aldolase/adducin N-terminal

3 of 3

2.37

1.57

0.0012

IPR006183

6-phosphogluconate dehydrogenase

2 of 2

2.37

0.79

0.0354

IPR006114

6-phosphogluconate dehydrogenase, C-terminal

2 of 2

2.37

0.79

0.0354

Protein Domains (SMART)

domain

description

count in network

strength

signal

false discovery rate

SM01007

Class II Aldolase and Adducin N-terminal domain

3 of 3

2.37

2.07

0.00012

SM01350

6-phosphogluconate dehydrogenase, C-terminal domain

2 of 2

2.37

1.23

0.0052

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