STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYF_03210Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (805 aa)    
Predicted Functional Partners:
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  0.967
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  0.963
MYF_02800
5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.945
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  0.791
MYF_01375
HIT domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.736
MYF_00955
P102/LppT family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.734
MYF_01025
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.696
dnaN
DNA polymerase III subunit beta; Binds the polymerase to DNA and acts as a sliding clamp; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.691
MYF_02745
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.620
MYF_01080
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.594
Your Current Organism:
Mycoplasma flocculare
NCBI taxonomy Id: 743971
Other names: M. flocculare ATCC 27399, Mycoplasma flocculare ATCC 27399, Mycoplasma flocculare Ms42, Mycoplasma flocculare str. ATCC 27399, Mycoplasma flocculare strain ATCC 27399
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.