STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYF_03280ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (535 aa)    
Predicted Functional Partners:
MYF_02330
ABC transporter ATP-binding protein and permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
0.872
MYF_03285
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
0.863
MYF_01155
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.828
MYF_00955
P102/LppT family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.770
MYF_01835
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.723
MYF_03275
Hypothetical protein; Gene may be truncated at N-terminus, based on match to ref|WP_014580040.1|; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.705
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
  
   0.622
ybeY
Putative rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
   
   0.609
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
 0.602
MYF_02730
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.576
Your Current Organism:
Mycoplasma flocculare
NCBI taxonomy Id: 743971
Other names: M. flocculare ATCC 27399, Mycoplasma flocculare ATCC 27399, Mycoplasma flocculare Ms42, Mycoplasma flocculare str. ATCC 27399, Mycoplasma flocculare strain ATCC 27399
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