Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUN74585.1 | mepA_1 | ERS852399_01201 | ERS852399_00461 | Cytidylate kinase. | Multidrug export protein mepA. | 0.827 |
bmrR | mepA_1 | ERS852399_00460 | ERS852399_00461 | Multidrug-efflux transporter 1 regulator. | Multidrug export protein mepA. | 0.649 |
gap | mepA_1 | ERS852399_01534 | ERS852399_00461 | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Multidrug export protein mepA. | 0.493 |
gap | ypfD | ERS852399_01534 | ERS852399_00338 | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 30S ribosomal protein S1 homolog. | 0.598 |
mepA_1 | CUN74585.1 | ERS852399_00461 | ERS852399_01201 | Multidrug export protein mepA. | Cytidylate kinase. | 0.827 |
mepA_1 | bmrR | ERS852399_00461 | ERS852399_00460 | Multidrug export protein mepA. | Multidrug-efflux transporter 1 regulator. | 0.649 |
mepA_1 | gap | ERS852399_00461 | ERS852399_01534 | Multidrug export protein mepA. | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.493 |
mepA_1 | ypfD | ERS852399_00461 | ERS852399_00338 | Multidrug export protein mepA. | 30S ribosomal protein S1 homolog. | 0.464 |
ypfD | gap | ERS852399_00338 | ERS852399_01534 | 30S ribosomal protein S1 homolog. | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.598 |
ypfD | mepA_1 | ERS852399_00338 | ERS852399_00461 | 30S ribosomal protein S1 homolog. | Multidrug export protein mepA. | 0.464 |