STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUN67667.1Uncharacterized conserved small protein. (100 aa)    
Predicted Functional Partners:
CUN67691.1
Uncharacterized protein conserved in bacteria.
 
    0.949
hipA
Serine/threonine-protein kinase HipA.
 
 
 0.698
CUN34830.1
Uncharacterised protein.
 
 
 0.666
prmB
50S ribosomal protein L3 glutamine methyltransferase.
  
    0.574
rimN
t(6)A37 threonylcarbamoyladenosine biosynthesis protein RimN; Belongs to the SUA5 family.
  
    0.507
CUN82354.1
Transposase and inactivated derivatives; Required for the transposition of the insertion element.
  
     0.468
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
       0.466
yvhJ
Putative transcriptional regulator yvhJ.
  
    0.412
Your Current Organism:
Collinsella aerofaciens
NCBI taxonomy Id: 74426
Other names: ATCC 25986, Bacteroides aerofaciens, C. aerofaciens, CCUG 28087, DSM 3979, Eubacterium aerofaciens, JCM 10188, NCTC 11838, Pseudobacterium aerofaciens
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