STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glnQ_3Glutamine transport ATP-binding protein GlnQ. (604 aa)    
Predicted Functional Partners:
CUN78536.1
Uncharacterised protein.
       0.773
yheI_1
Probable multidrug resistance ABC transporter ATP-binding/permease protein YheI.
 
     0.673
drrA_1
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
 
   
0.582
drrA_2
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
 
    0.525
ugpC_1
Sn-glycerol-3-phosphate import ATP-binding protein UgpC.
  
     0.516
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
  
     0.493
CUN78656.1
Uncharacterised protein.
      
0.474
CUN78681.1
Uncharacterised protein.
       0.474
macB_5
Macrolide export ATP-binding/permease protein MacB.
 
    0.470
ssuB
Aliphatic sulfonates import ATP-binding protein SsuB.
 
     0.454
Your Current Organism:
Collinsella aerofaciens
NCBI taxonomy Id: 74426
Other names: ATCC 25986, Bacteroides aerofaciens, C. aerofaciens, CCUG 28087, DSM 3979, Eubacterium aerofaciens, JCM 10188, NCTC 11838, Pseudobacterium aerofaciens
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