STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wcaJ_2Putative colanic biosynthesis UDP-glucose lipid carrier transferase. (249 aa)    
Predicted Functional Partners:
ywqD
Tyrosine-protein kinase YwqD.
 
  
 0.835
rfbC
Probable dTDP-4-dehydrorhamnose 3%2C5-epimerase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
  
 0.717
cap8A
Capsular polysaccharide type 8 biosynthesis protein cap8A.
 
  
 0.678
hyaD_3
Hyaluronan synthase.
  
  
 0.651
CUN39268.1
Putative glycosyl transferase.
 
      0.639
CUN94462.1
Mannosyltransferase OCH1 and related enzymes.
  
  
 0.631
CUN94396.1
Oligosaccharide biosynthesis protein Alg14 like.
     
 0.606
nusG_2
Transcription antitermination protein nusG.
  
    0.603
CUN94424.1
Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase.
     
 0.601
CUN94536.1
Uncharacterised protein.
       0.574
Your Current Organism:
Collinsella aerofaciens
NCBI taxonomy Id: 74426
Other names: ATCC 25986, Bacteroides aerofaciens, C. aerofaciens, CCUG 28087, DSM 3979, Eubacterium aerofaciens, JCM 10188, NCTC 11838, Pseudobacterium aerofaciens
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