STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
artM_3Arginine transport ATP-binding protein ArtM. (241 aa)    
Predicted Functional Partners:
CUO02669.1
Acidobacterial duplicated orphan permease.
 
 
 0.996
CUO00035.1
FtsX-like permease family.
 
 
 0.970
macB_3
Macrolide export ATP-binding/permease protein MacB.
 
 0.967
yheI_2
Probable multidrug resistance ABC transporter ATP-binding/permease protein YheI.
     
0.865
CUN68933.1
Putative multidrug export ATP-binding/permease protein SAV1866.
     
0.816
CUN69251.1
Putative multidrug export ATP-binding/permease protein SAV1866.
     
0.783
yheH
Probable multidrug resistance ABC transporter ATP-binding/permease protein YheH.
     
0.730
CUO01876.1
Putative multidrug export ATP-binding/permease protein SAV1866.
     
0.720
drrA_1
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
  
 0.711
macA
Macrolide-specific efflux protein macA precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.628
Your Current Organism:
Collinsella aerofaciens
NCBI taxonomy Id: 74426
Other names: ATCC 25986, Bacteroides aerofaciens, C. aerofaciens, CCUG 28087, DSM 3979, Eubacterium aerofaciens, JCM 10188, NCTC 11838, Pseudobacterium aerofaciens
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