Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEJ18276.1AAA ATPase. (458 aa)    
Predicted Functional Partners:
AEJ20121.1
Hypothetical protein.
  
     0.731
AEJ18266.1
Hypothetical protein.
  
     0.692
AEJ18451.1
ATPase (AAA+ superfamily)-like protein.
  
     0.683
AEJ18533.1
AAA family ATPase.
  
     0.682
AEJ19043.1
AAA ATPase.
  
     0.672
AEJ20777.1
Hypothetical protein.
 
     0.629
AEJ18422.1
Hypothetical protein.
 
     0.559
AEJ20778.1
Domain of unknown function DUF1814.
 
     0.525
AEJ18423.1
Domain of unknown function DUF1814.
 
     0.431
Your Current Organism:
Treponema caldarium
NCBI taxonomy Id: 744872
Other names: Spirochaeta caldaria DSM 7334, Spirochaeta caldaria H1, T. caldarium DSM 7334, Treponema caldaria DSM 7334, Treponema caldaria H1, Treponema caldaria str. DSM 7334, Treponema caldaria strain DSM 7334, Treponema caldarium DSM 7334
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