STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ18475.1Xylan 1,4-beta-xylosidase. (698 aa)    
Predicted Functional Partners:
AEJ20564.1
Xylan 1,4-beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.921
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
  
  
  0.827
AEJ20459.1
Aldehyde reductase.
     
 0.805
uxaC
Uronate isomerase.
     
  0.800
AEJ18977.1
Endo-1,4-beta-xylanase.
 
  
 0.603
AEJ18473.1
Histidine kinase.
       0.531
AEJ18474.1
Two component transcriptional regulator, LuxR family.
       0.531
AEJ18476.1
Extracellular solute-binding protein family 1.
       0.483
AEJ18472.1
3-oxoacyl-(acyl-carrier-protein) reductase.
   
  0.443
AEJ18975.1
Redox-active disulfide protein 2.
    
 0.415
Your Current Organism:
Treponema caldarium
NCBI taxonomy Id: 744872
Other names: Spirochaeta caldaria DSM 7334, Spirochaeta caldaria H1, T. caldarium DSM 7334, Treponema caldaria DSM 7334, Treponema caldaria H1, Treponema caldaria str. DSM 7334, Treponema caldaria strain DSM 7334, Treponema caldarium DSM 7334
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