STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ18491.1NAD(P)H dehydrogenase (quinone). (208 aa)    
Predicted Functional Partners:
AEJ18492.1
Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
       0.773
AEJ18493.1
Hypothetical protein.
       0.741
AEJ20017.1
Sodium/hydrogen exchanger.
  
 
 0.704
AEJ18813.1
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
 
  
 0.657
AEJ19101.1
Diaminopimelate decarboxylase.
    
 0.606
AEJ18494.1
Hypothetical protein.
       0.593
AEJ18490.1
Protein of unknown function DUF59.
       0.556
AEJ19689.1
CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family.
   
  
 0.530
AEJ18486.1
Cysteine desulfurase, SufS subfamily; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
    0.522
AEJ18488.1
FeS assembly protein SufB.
       0.522
Your Current Organism:
Treponema caldarium
NCBI taxonomy Id: 744872
Other names: Spirochaeta caldaria DSM 7334, Spirochaeta caldaria H1, T. caldarium DSM 7334, Treponema caldaria DSM 7334, Treponema caldaria H1, Treponema caldaria str. DSM 7334, Treponema caldaria strain DSM 7334, Treponema caldarium DSM 7334
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