STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ18702.1ABC-type transporter, integral membrane subunit; Belongs to the binding-protein-dependent transport system permease family. (369 aa)    
Predicted Functional Partners:
AEJ18700.1
Monosaccharide-transporting ATPase.
 
 
 0.970
AEJ18701.1
ABC-type transporter, integral membrane subunit; Belongs to the binding-protein-dependent transport system permease family.
 
    
0.849
AEJ18661.1
Hypothetical protein.
 
  
 0.817
AEJ18703.1
Hypothetical protein.
       0.804
AEJ18699.1
ATPase (AAA+ superfamily)-like protein.
       0.773
rbsD
D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
  
  
 0.610
AEJ20001.1
D-galactose ABC transporter substrate binding protein precursor.
 
 
 0.481
AEJ18704.1
Na/Pi-cotransporter II-related protein.
       0.475
AEJ18208.1
Monosaccharide-transporting ATPase.
  
 
 0.407
AEJ18295.1
Monosaccharide-transporting ATPase.
  
 
 0.407
Your Current Organism:
Treponema caldarium
NCBI taxonomy Id: 744872
Other names: Spirochaeta caldaria DSM 7334, Spirochaeta caldaria H1, T. caldarium DSM 7334, Treponema caldaria DSM 7334, Treponema caldaria H1, Treponema caldaria str. DSM 7334, Treponema caldaria strain DSM 7334, Treponema caldarium DSM 7334
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