STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ18756.1ABC-type transporter, integral membrane subunit. (313 aa)    
Predicted Functional Partners:
AEJ18757.1
ABC-type transporter, integral membrane subunit.
 
 0.991
AEJ18758.1
Sugar ABC transporter substrate-binding protein.
 
 
 0.977
AEJ18790.1
ABC-type transporter, integral membrane subunit.
 
 0.968
AEJ20529.1
ABC-type transporter, integral membrane subunit.
 
 0.968
AEJ20560.1
ABC-type transporter, integral membrane subunit.
 
 0.968
AEJ20562.1
Extracellular solute-binding protein family 1.
 
 
 0.954
AEJ20531.1
Extracellular solute-binding protein family 1.
 
 
 0.949
AEJ18791.1
Extracellular solute-binding protein family 1.
 
 
 0.916
AEJ19159.1
Cephalosporin-C deacetylase.
 
     0.608
AEJ18760.1
Alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family.
 
     0.558
Your Current Organism:
Treponema caldarium
NCBI taxonomy Id: 744872
Other names: Spirochaeta caldaria DSM 7334, Spirochaeta caldaria H1, T. caldarium DSM 7334, Treponema caldaria DSM 7334, Treponema caldaria H1, Treponema caldaria str. DSM 7334, Treponema caldaria strain DSM 7334, Treponema caldarium DSM 7334
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