STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ18968.1Transcriptional regulator, LacI family. (324 aa)    
Predicted Functional Partners:
AEJ20043.1
Transcriptional regulator, GntR family with LacI sensor.
  
     0.756
AEJ18227.1
Transcriptional regulator, LacI family.
  
     0.746
AEJ18973.1
Ribokinase.
  
 0.722
AEJ19996.1
Glutamate synthase (ferredoxin).
    
 
 0.715
rbsD
D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
  
  
 0.701
AEJ18971.1
ABC-type transporter, integral membrane subunit; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.698
rbsA
Monosaccharide-transporting ATPase; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
  
 0.691
AEJ18972.1
Periplasmic binding protein/LacI transcriptional regulator.
 
  
0.667
AEJ18930.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 
 0.556
AEJ18967.1
Hypothetical protein.
       0.529
Your Current Organism:
Treponema caldarium
NCBI taxonomy Id: 744872
Other names: Spirochaeta caldaria DSM 7334, Spirochaeta caldaria H1, T. caldarium DSM 7334, Treponema caldaria DSM 7334, Treponema caldaria H1, Treponema caldaria str. DSM 7334, Treponema caldaria strain DSM 7334, Treponema caldarium DSM 7334
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