STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ19239.1ATP-binding region ATPase domain protein. (182 aa)    
Predicted Functional Partners:
AEJ19240.1
Anti-sigma-factor antagonist.
  
 
 0.912
AEJ20191.1
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
  
 
 0.854
AEJ18714.1
Signal transduction histidine kinase.
  
  
 0.811
AEJ19241.1
Protein serine/threonine phosphatase with GAF(s) sensor(s).
  
 
 0.792
AEJ18897.1
Two component transcriptional regulator, LuxR family.
  
  
 0.778
AEJ20481.1
Hpt sensor hybrid histidine kinase.
  
  
 0.778
AEJ20753.1
Diguanylate cyclase with PAS/PAC sensor.
  
  
 0.712
AEJ18400.1
Anti-sigma-factor antagonist.
  
 
 0.693
AEJ18640.1
Sulfate transporter/antisigma-factor antagonist STAS.
  
 
 0.693
AEJ18849.1
Sulfate transporter/antisigma-factor antagonist STAS; Belongs to the anti-sigma-factor antagonist family.
  
 
 0.693
Your Current Organism:
Treponema caldarium
NCBI taxonomy Id: 744872
Other names: Spirochaeta caldaria DSM 7334, Spirochaeta caldaria H1, T. caldarium DSM 7334, Treponema caldaria DSM 7334, Treponema caldaria H1, Treponema caldaria str. DSM 7334, Treponema caldaria strain DSM 7334, Treponema caldarium DSM 7334
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