STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ19296.1Tetratricopeptide TPR_1 repeat-containing protein. (216 aa)    
Predicted Functional Partners:
AEJ19292.1
Tetratricopeptide TPR_2 repeat-containing protein.
 
   
 0.861
AEJ19295.1
Protein of unknown function DUF583.
       0.805
AEJ19297.1
MiaB-like tRNA modifying enzyme.
       0.804
AEJ19294.1
Arogenate dehydrogenase (NADP(+)).
       0.795
AEJ19377.1
Tetratricopeptide TPR_2 repeat-containing protein.
 
   
 0.775
AEJ18528.1
Restriction endonuclease.
 
   
 0.771
AEJ20694.1
Tetratricopeptide TPR_2 repeat-containing protein.
 
   
 0.769
AEJ19320.1
Restriction endonuclease.
 
   
 0.768
AEJ19322.1
Tetratricopeptide TPR_2 repeat-containing protein.
 
   
 0.768
AEJ19579.1
Tetratricopeptide TPR_2 repeat-containing protein.
 
   
 0.765
Your Current Organism:
Treponema caldarium
NCBI taxonomy Id: 744872
Other names: Spirochaeta caldaria DSM 7334, Spirochaeta caldaria H1, T. caldarium DSM 7334, Treponema caldaria DSM 7334, Treponema caldaria H1, Treponema caldaria str. DSM 7334, Treponema caldaria strain DSM 7334, Treponema caldarium DSM 7334
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.