STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ19332.1Radical SAM domain protein. (338 aa)    
Predicted Functional Partners:
AEJ19136.1
AMMECR1 domain protein.
     0.958
AEJ19333.1
Hypothetical protein.
       0.790
AEJ19149.1
UPF0103/Mediator of ErbB2-driven cell motility-containing protein.
 
     0.776
AEJ19437.1
UPF0103/Mediator of ErbB2-driven cell motility-containing protein.
 
     0.746
msrA
Peptide methionine sulfoxide reductase msrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
       0.592
AEJ20112.1
Pyruvate dehydrogenase (acetyl-transferring).
   
  
 0.499
AEJ20589.1
Pyruvate ferredoxin/flavodoxin oxidoreductase.
     
 0.481
AEJ20545.1
phosphoribosyl-ATP diphosphatase.
  
    0.417
AEJ18186.1
Iron-containing alcohol dehydrogenase.
  
  
 0.412
AEJ18245.1
Alcohol dehydrogenase.
  
  
 0.412
Your Current Organism:
Treponema caldarium
NCBI taxonomy Id: 744872
Other names: Spirochaeta caldaria DSM 7334, Spirochaeta caldaria H1, T. caldarium DSM 7334, Treponema caldaria DSM 7334, Treponema caldaria H1, Treponema caldaria str. DSM 7334, Treponema caldaria strain DSM 7334, Treponema caldarium DSM 7334
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.