STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ19413.1P83100 family protein. (539 aa)    
Predicted Functional Partners:
AEJ19541.1
Hypothetical protein.
 
  
 0.802
AEJ18926.1
Putative transcriptional regulator, Crp/Fnr family.
 
   0.801
AEJ20474.1
OmpA/MotB domain protein.
 
  
 0.801
AEJ20824.1
Fibronectin type III domain protein.
 
     0.798
AEJ19514.1
Tetratricopeptide TPR_2 repeat-containing protein.
 
   0.793
AEJ20235.1
Hypothetical protein.
 
   
 0.792
AEJ19780.1
Radical SAM domain protein.
 
    0.783
AEJ18624.1
Outer membrane lipoprotein carrier protein LolA.
  
  
 0.782
AEJ20188.1
Glycoside hydrolase family 13 domain protein.
  
    0.774
AEJ18196.1
Hypothetical protein.
  
     0.773
Your Current Organism:
Treponema caldarium
NCBI taxonomy Id: 744872
Other names: Spirochaeta caldaria DSM 7334, Spirochaeta caldaria H1, T. caldarium DSM 7334, Treponema caldaria DSM 7334, Treponema caldaria H1, Treponema caldaria str. DSM 7334, Treponema caldaria strain DSM 7334, Treponema caldarium DSM 7334
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