STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ19576.1Hypothetical protein. (428 aa)    
Predicted Functional Partners:
AEJ19577.1
Conserved hypothetical protein CHP00095.
       0.786
AEJ19580.1
Radical SAM enzyme, Cfr family; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs.
       0.558
AEJ19575.1
Hypothetical protein.
       0.543
AEJ19578.1
Hypothetical protein.
       0.539
AEJ19579.1
Tetratricopeptide TPR_2 repeat-containing protein.
       0.539
AEJ18380.1
Extracellular solute-binding protein family 1.
  
     0.461
AEJ20613.1
Hypothetical protein.
 
     0.461
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
       0.421
AEJ19573.1
Single-strand binding protein.
       0.412
Your Current Organism:
Treponema caldarium
NCBI taxonomy Id: 744872
Other names: Spirochaeta caldaria DSM 7334, Spirochaeta caldaria H1, T. caldarium DSM 7334, Treponema caldaria DSM 7334, Treponema caldaria H1, Treponema caldaria str. DSM 7334, Treponema caldaria strain DSM 7334, Treponema caldarium DSM 7334
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.