STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ19595.1Ferredoxin. (161 aa)    
Predicted Functional Partners:
AEJ19594.1
Xanthine dehydrogenase.
 
 0.995
AEJ19596.1
Molybdopterin dehydrogenase FAD-binding protein.
 
 
 0.990
AEJ18770.1
Carbon-monoxide dehydrogenase (acceptor).
 
 0.975
AEJ19593.1
DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
       0.797
AEJ19592.1
Polysaccharide biosynthesis protein CapD.
       0.796
AEJ18751.1
Conserved hypothetical protein CHP03172.
 
  
 0.783
AEJ19591.1
NusG antitermination factor.
       0.684
AEJ18925.1
Amidohydrolase.
 
  
 0.571
AEJ19589.1
Sporulation domain-containing protein.
  
   0.557
AEJ20589.1
Pyruvate ferredoxin/flavodoxin oxidoreductase.
     
 0.542
Your Current Organism:
Treponema caldarium
NCBI taxonomy Id: 744872
Other names: Spirochaeta caldaria DSM 7334, Spirochaeta caldaria H1, T. caldarium DSM 7334, Treponema caldaria DSM 7334, Treponema caldaria H1, Treponema caldaria str. DSM 7334, Treponema caldaria strain DSM 7334, Treponema caldarium DSM 7334
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