STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ19777.1Methyltransferase type 12. (644 aa)    
Predicted Functional Partners:
AEJ19778.1
Acylneuraminate cytidylyltransferase.
  
 0.972
AEJ19780.1
Radical SAM domain protein.
 
  
 0.949
AEJ19779.1
Hypothetical protein.
  
  
 0.830
AEJ19776.1
ATP-dependent carboxylate-amine ligase domain protein ATP-grasp.
 
  
 0.805
AEJ18624.1
Outer membrane lipoprotein carrier protein LolA.
 
    0.752
AEJ19541.1
Hypothetical protein.
 
  
 0.744
AEJ20474.1
OmpA/MotB domain protein.
 
  
 0.739
AEJ18961.1
Protein of unknown function DUF115.
 
   
 0.735
AEJ18196.1
Hypothetical protein.
 
     0.727
AEJ20824.1
Fibronectin type III domain protein.
  
     0.726
Your Current Organism:
Treponema caldarium
NCBI taxonomy Id: 744872
Other names: Spirochaeta caldaria DSM 7334, Spirochaeta caldaria H1, T. caldarium DSM 7334, Treponema caldaria DSM 7334, Treponema caldaria H1, Treponema caldaria str. DSM 7334, Treponema caldaria strain DSM 7334, Treponema caldarium DSM 7334
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.