STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ19978.1Hypothetical protein. (362 aa)    
Predicted Functional Partners:
AEJ19979.1
Lytic transglycosylase catalytic.
     
 0.808
AEJ19980.1
OmpA family protein.
   
   0.796
htpG
Chaperone protein htpG; Molecular chaperone. Has ATPase activity.
  
 0.627
AEJ19790.1
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
    
 
 0.599
AEJ19976.1
Hypothetical protein.
       0.578
AEJ19977.1
Hypothetical protein.
       0.564
AEJ19232.1
Ankyrin.
  
 0.558
AEJ19658.1
Ankyrin.
  
 0.558
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.557
AEJ18527.1
Peptidoglycan-binding lysin domain protein.
  
 0.554
Your Current Organism:
Treponema caldarium
NCBI taxonomy Id: 744872
Other names: Spirochaeta caldaria DSM 7334, Spirochaeta caldaria H1, T. caldarium DSM 7334, Treponema caldaria DSM 7334, Treponema caldaria H1, Treponema caldaria str. DSM 7334, Treponema caldaria strain DSM 7334, Treponema caldarium DSM 7334
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.