STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ20001.1D-galactose ABC transporter substrate binding protein precursor. (331 aa)    
Predicted Functional Partners:
AEJ20002.1
Monosaccharide-transporting ATPase.
 
 0.984
AEJ20003.1
ABC-type transporter, integral membrane subunit; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.982
AEJ18714.1
Signal transduction histidine kinase.
  
 
 0.789
AEJ18366.1
PAS/PAC sensor hybrid histidine kinase.
 
 
 
 0.757
AEJ18353.1
Integral membrane sensor signal transduction histidine kinase.
   
 
 0.747
AEJ18897.1
Two component transcriptional regulator, LuxR family.
  
 
 0.733
AEJ20481.1
Hpt sensor hybrid histidine kinase.
  
 
 0.733
AEJ20844.1
Putative PAS/PAC sensor protein.
   
 
 0.724
AEJ19998.1
Signal transduction histidine kinase, LytS.
 
 
 0.712
AEJ20448.1
Diguanylate cyclase with beta propeller sensor.
   
 
 0.700
Your Current Organism:
Treponema caldarium
NCBI taxonomy Id: 744872
Other names: Spirochaeta caldaria DSM 7334, Spirochaeta caldaria H1, T. caldarium DSM 7334, Treponema caldaria DSM 7334, Treponema caldaria H1, Treponema caldaria str. DSM 7334, Treponema caldaria strain DSM 7334, Treponema caldarium DSM 7334
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