STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ20109.1Transcriptional regulator, DeoR family. (251 aa)    
Predicted Functional Partners:
AEJ20362.1
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.830
AEJ19170.1
PfkB domain protein.
 
  
 0.802
AEJ20114.1
Sorbitol-6-phosphate 2-dehydrogenase.
 
  
 0.783
AEJ20110.1
Dihydrolipoyllysine-residue acetyltransferase.
     
 0.773
AEJ20111.1
Dihydrolipoamide dehydrogenase.
       0.762
AEJ20115.1
Carbohydrate kinase, FGGY.
 
  
 0.728
AEJ20113.1
Hypothetical protein.
 
     0.674
AEJ20112.1
Pyruvate dehydrogenase (acetyl-transferring).
  
    0.658
AEJ20366.1
PTS modulated transcriptional regulator, MtlR family.
  
  
 0.540
AEJ20108.1
Dihydrouridine synthase DuS; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.
       0.524
Your Current Organism:
Treponema caldarium
NCBI taxonomy Id: 744872
Other names: Spirochaeta caldaria DSM 7334, Spirochaeta caldaria H1, T. caldarium DSM 7334, Treponema caldaria DSM 7334, Treponema caldaria H1, Treponema caldaria str. DSM 7334, Treponema caldaria strain DSM 7334, Treponema caldarium DSM 7334
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