Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEJ20139.1Two component transcriptional regulator, AraC family. (519 aa)    
Predicted Functional Partners:
AEJ20140.1
Signal transduction histidine kinase, LytS.
 
  
 0.936
AEJ20141.1
Hypothetical protein.
 
     0.916
AEJ20138.1
Periplasmic binding protein/LacI transcriptional regulator.
 
     0.870
AEJ20270.1
Multi-sensor signal transduction histidine kinase.
 
 
 0.868
AEJ20331.1
Multi-sensor signal transduction histidine kinase.
 
 
 0.864
AEJ20432.1
Integral membrane sensor signal transduction histidine kinase.
 
 
 0.853
AEJ20143.1
ATP-dependent Clp protease, ATP-binding subunit clpA; Belongs to the ClpA/ClpB family.
  
    0.716
AEJ18204.1
Signal transduction histidine kinase, LytS.
 
    0.690
AEJ19998.1
Signal transduction histidine kinase, LytS.
 
  
 0.680
aat
Leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.
       0.671
Your Current Organism:
Treponema caldarium
NCBI taxonomy Id: 744872
Other names: Spirochaeta caldaria DSM 7334, Spirochaeta caldaria H1, T. caldarium DSM 7334, Treponema caldaria DSM 7334, Treponema caldaria H1, Treponema caldaria str. DSM 7334, Treponema caldaria strain DSM 7334, Treponema caldarium DSM 7334
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