STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ20140.1Signal transduction histidine kinase, LytS. (490 aa)    
Predicted Functional Partners:
AEJ20139.1
Two component transcriptional regulator, AraC family.
 
  
 0.936
AEJ20141.1
Hypothetical protein.
 
     0.896
AEJ20753.1
Diguanylate cyclase with PAS/PAC sensor.
  
 
 0.872
AEJ20138.1
Periplasmic binding protein/LacI transcriptional regulator.
 
     0.850
AEJ20191.1
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
 
  
 0.848
AEJ18714.1
Signal transduction histidine kinase.
  
 
 0.773
AEJ18353.1
Integral membrane sensor signal transduction histidine kinase.
  
 
 0.770
AEJ20932.1
Integral membrane sensor signal transduction histidine kinase.
   
 
 0.766
AEJ18366.1
PAS/PAC sensor hybrid histidine kinase.
 
 
 0.743
AEJ20844.1
Putative PAS/PAC sensor protein.
  
 
 0.743
Your Current Organism:
Treponema caldarium
NCBI taxonomy Id: 744872
Other names: Spirochaeta caldaria DSM 7334, Spirochaeta caldaria H1, T. caldarium DSM 7334, Treponema caldaria DSM 7334, Treponema caldaria H1, Treponema caldaria str. DSM 7334, Treponema caldaria strain DSM 7334, Treponema caldarium DSM 7334
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.