STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ20215.1Alcohol dehydrogenase. (420 aa)    
Predicted Functional Partners:
AEJ20214.1
Sugar-phosphate isomerase, RpiB/LacA/LacB family.
     
 0.795
AEJ20216.1
Protein of unknown function DUF81.
  
    0.785
AEJ18186.1
Iron-containing alcohol dehydrogenase.
  
     0.773
AEJ20213.1
1-deoxy-D-xylulose-5-phosphate synthase.
 
   
 0.704
AEJ20212.1
Transketolase.
     
 0.658
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
  
 0.596
AEJ20589.1
Pyruvate ferredoxin/flavodoxin oxidoreductase.
  
  
 0.546
AEJ18453.1
Radical SAM domain protein.
 
  
 0.501
AEJ20870.1
NADH dehydrogenase (quinone).
  
  
 0.492
AEJ20632.1
Aldehyde dehydrogenase (NAD(+)).
 
 
 0.432
Your Current Organism:
Treponema caldarium
NCBI taxonomy Id: 744872
Other names: Spirochaeta caldaria DSM 7334, Spirochaeta caldaria H1, T. caldarium DSM 7334, Treponema caldaria DSM 7334, Treponema caldaria H1, Treponema caldaria str. DSM 7334, Treponema caldaria strain DSM 7334, Treponema caldarium DSM 7334
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