STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ20332.1Two component transcriptional regulator, AraC family. (404 aa)    
Predicted Functional Partners:
AEJ20331.1
Multi-sensor signal transduction histidine kinase.
 
 
 0.975
AEJ20270.1
Multi-sensor signal transduction histidine kinase.
 
 
 0.909
AEJ20432.1
Integral membrane sensor signal transduction histidine kinase.
 
 
 0.880
AEJ20333.1
Periplasmic binding protein/LacI transcriptional regulator.
       0.777
AEJ20140.1
Signal transduction histidine kinase, LytS.
 
  
 0.710
AEJ19676.1
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
 
 0.709
AEJ18204.1
Signal transduction histidine kinase, LytS.
 
  
 0.660
AEJ19998.1
Signal transduction histidine kinase, LytS.
 
  
 0.640
AEJ20730.1
Integral membrane sensor signal transduction histidine kinase.
 
  
 0.626
AEJ20753.1
Diguanylate cyclase with PAS/PAC sensor.
 
 
 
 0.619
Your Current Organism:
Treponema caldarium
NCBI taxonomy Id: 744872
Other names: Spirochaeta caldaria DSM 7334, Spirochaeta caldaria H1, T. caldarium DSM 7334, Treponema caldaria DSM 7334, Treponema caldaria H1, Treponema caldaria str. DSM 7334, Treponema caldaria strain DSM 7334, Treponema caldarium DSM 7334
Server load: high (84%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.