STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ20359.1Auxin Efflux Carrier. (326 aa)    
Predicted Functional Partners:
AEJ20898.1
Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)).
  
  
 0.817
AEJ20358.1
Transcriptional regulator, LacI family.
       0.773
AEJ20360.1
RbsD or FucU transport; Belongs to the RbsD / FucU family.
       0.671
fucI
L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose.
       0.601
AEJ19794.1
Hypothetical protein.
  
     0.534
AEJ20351.1
Hypothetical protein.
 
     0.502
AEJ20430.1
Sugar ABC transporter substrate-binding protein.
 
     0.499
AEJ20353.1
Protein of unknown function DUF214.
 
     0.439
AEJ18247.1
Hypothetical protein.
  
     0.424
AEJ18298.1
PfkB domain protein.
  
     0.423
Your Current Organism:
Treponema caldarium
NCBI taxonomy Id: 744872
Other names: Spirochaeta caldaria DSM 7334, Spirochaeta caldaria H1, T. caldarium DSM 7334, Treponema caldaria DSM 7334, Treponema caldaria H1, Treponema caldaria str. DSM 7334, Treponema caldaria strain DSM 7334, Treponema caldarium DSM 7334
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.