STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ20589.1Pyruvate ferredoxin/flavodoxin oxidoreductase. (1185 aa)    
Predicted Functional Partners:
AEJ20734.1
2-oxoglutarate synthase.
  
 0.999
AEJ20735.1
3-methyl-2-oxobutanoate dehydrogenase (ferredoxin).
  
 0.998
AEJ20540.1
Flavocytochrome c.
  
 
 0.990
pckG
Phosphoenolpyruvate carboxykinase (GTP); Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family.
   
 
 0.986
AEJ19408.1
Indolepyruvate ferredoxin oxidoreductase.
  
 
 0.985
AEJ20733.1
Pyruvate/ketoisovalerate oxidoreductase, gamma subunit.
  
 
 0.985
AEJ20434.1
Butyrate--CoA ligase.
  
 
 0.967
AEJ18930.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.966
AEJ19293.1
Phosphate acetyltransferase.
  
 0.963
AEJ19180.1
Oxaloacetate decarboxylase alpha subunit.
  
 
 0.953
Your Current Organism:
Treponema caldarium
NCBI taxonomy Id: 744872
Other names: Spirochaeta caldaria DSM 7334, Spirochaeta caldaria H1, T. caldarium DSM 7334, Treponema caldaria DSM 7334, Treponema caldaria H1, Treponema caldaria str. DSM 7334, Treponema caldaria strain DSM 7334, Treponema caldarium DSM 7334
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