STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ20746.1ABC transporter related protein. (283 aa)    
Predicted Functional Partners:
AEJ20744.1
Transcriptional regulator, GntR family.
 
  
 0.937
AEJ19433.1
ABC-2 type transporter.
  
 
 0.822
AEJ20745.1
Hypothetical protein.
       0.773
lolD
Phosphonate-transporting ATPase; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
 
  
 0.678
AEJ20354.1
Phosphonate-transporting ATPase.
 
  
 0.646
AEJ20706.1
ABC-2 type transporter.
  
  
 0.608
AEJ20130.1
Phosphonate-transporting ATPase.
 
  
 0.573
AEJ20356.1
Transcriptional regulator, GntR family.
 
  
 0.542
argS
Arginyl-tRNA synthetase.
  
     0.481
AEJ20747.1
Hypothetical protein.
       0.473
Your Current Organism:
Treponema caldarium
NCBI taxonomy Id: 744872
Other names: Spirochaeta caldaria DSM 7334, Spirochaeta caldaria H1, T. caldarium DSM 7334, Treponema caldaria DSM 7334, Treponema caldaria H1, Treponema caldaria str. DSM 7334, Treponema caldaria strain DSM 7334, Treponema caldarium DSM 7334
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.