STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ20766.1HAD-superfamily hydrolase, subfamily IIB. (314 aa)    
Predicted Functional Partners:
AEJ20765.1
Pseudouridine synthase.
  
   0.789
AEJ18687.1
NAD-dependent epimerase/dehydratase.
  
 
 0.732
AEJ18674.1
CBS domain containing protein.
  
 
 0.705
AEJ19614.1
Undecaprenyl-phosphate galactose phosphotransferase, WbaP.
  
  
 0.705
AEJ20767.1
Ste24 endopeptidase.
   
 
 0.672
AEJ19600.1
Nucleotide sugar dehydrogenase.
  
  
 0.628
AEJ19604.1
Glycosyl transferase family 2.
  
 
 0.533
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
  
 0.520
AEJ20083.1
ATP-dependent DNA helicase, RecQ family.
   
 
 0.476
AEJ18690.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.472
Your Current Organism:
Treponema caldarium
NCBI taxonomy Id: 744872
Other names: Spirochaeta caldaria DSM 7334, Spirochaeta caldaria H1, T. caldarium DSM 7334, Treponema caldaria DSM 7334, Treponema caldaria H1, Treponema caldaria str. DSM 7334, Treponema caldaria strain DSM 7334, Treponema caldarium DSM 7334
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