STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ20869.1Hydrogenase, Fe-only. (581 aa)    
Predicted Functional Partners:
AEJ20873.1
NADH dehydrogenase (ubiquinone) 24 kDa subunit.
 
 0.997
AEJ20870.1
NADH dehydrogenase (quinone).
 
 0.996
AEJ20871.1
NAD(P)-dependent iron-only hydrogenase iron-sulfur protein.
 
 
 0.987
AEJ20589.1
Pyruvate ferredoxin/flavodoxin oxidoreductase.
  
 
 0.926
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 
 0.923
AEJ18385.1
Hypothetical protein.
 
 
 0.919
AEJ18388.1
Hypothetical protein.
 
 
 0.905
AEJ19691.1
Protein of unknown function DUF39.
   
 
 0.874
AEJ19692.1
NIL domain-containing protein.
  
  
 0.870
AEJ20009.1
Radical SAM domain protein.
 
  
 0.848
Your Current Organism:
Treponema caldarium
NCBI taxonomy Id: 744872
Other names: Spirochaeta caldaria DSM 7334, Spirochaeta caldaria H1, T. caldarium DSM 7334, Treponema caldaria DSM 7334, Treponema caldaria H1, Treponema caldaria str. DSM 7334, Treponema caldaria strain DSM 7334, Treponema caldarium DSM 7334
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.