STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEJ20940.1ABC-type transporter, integral membrane subunit. (292 aa)    
Predicted Functional Partners:
AEJ20941.1
Extracellular solute-binding protein family 1.
 
 0.989
AEJ20939.1
ABC-type transporter, integral membrane subunit.
 
 0.971
AEJ19093.1
Glycerol-3-phosphate-transporting ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.928
AEJ18259.1
ABC-type transporter, integral membrane subunit.
 
 0.925
AEJ18233.1
ABC-type transporter, integral membrane subunit.
   0.866
AEJ18519.1
ABC-type transporter, integral membrane subunit.
   0.866
AEJ20199.1
ABC-type transporter, integral membrane subunit.
   0.866
AEJ18478.1
ABC-type transporter, integral membrane subunit.
   0.865
AEJ18776.1
ABC-type transporter, integral membrane subunit.
   0.865
AEJ20399.1
ABC-type transporter, integral membrane subunit.
   0.864
Your Current Organism:
Treponema caldarium
NCBI taxonomy Id: 744872
Other names: Spirochaeta caldaria DSM 7334, Spirochaeta caldaria H1, T. caldarium DSM 7334, Treponema caldaria DSM 7334, Treponema caldaria H1, Treponema caldaria str. DSM 7334, Treponema caldaria strain DSM 7334, Treponema caldarium DSM 7334
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